With Ingenuity Pathways Analysis you can summarize a variety of biological information around your gene of interest. Create visually appealing networks of your pathway or your gene lists and start discovering biology! Which biological processes does your gene list represent? IPA can tell you immediately, based on their curated information source extracted from the literature.
We have several free IPA licenses for use by VIB scientists.
Get it!
VIB scientists: visit the VIB Apps Catalog
Master students: mail to This email address is being protected from spambots. You need JavaScript enabled to view it. for more information
IPA news
Online Tutorials
- Recorded IPA webinars and tutorial videos (in particular the 3-part series covering most of IPA)
- IPA workflows (the different IPA modules and their objectives)
- PLEASE view this 18 minute video about p.values, BH correction and z-scores
- A large number of additional videos can be found at the New Qiagen dedicated IPA-video channel
- Search for a particular topic or keyword on the search page
- The IPA online manual may also be of help
IPA Data sharing
- How can I share data with other IPA users?
- Sharing data with another IPA user (step 1 of 2)
- Accessing data shared with ME by another IPA user (step 2 of 2)
Recent custom IPA training slides
Sessions June-July 2020
BITS Material
- Check the BITS IPA training page: slides, exercises, example data sets
- Slide-deck explaining most of IPA features
- IPA quick reference card
- Convert IDs between species with BIOMart
- IPA create large lists from search results
- Analyze non-human data in IPA
- Special considerations about Data upload
- Parkinson's Disease as a model to demonstrate Genvestigator and IPA integration
- IPA core analysis on 10X scRNA-Seq data (added: 12/2018)
NEW 2020
IPA is now more than just IPA thanks to 'Analysis Match', 'BioProfiler', 'Activity Plots', 'Metadata keys', and more ...
- learn how to understand biological using Analysis match (video)
- IPA manual about Analysis Match
- IPA manual about BioProfiler
- IPA Activity Plots
- IPA Metadata Keys : a primer on adding MetaData to uploads in order to mine large datasets with keywords can be found here
Omicsoft LandExplorer (NEW since 2020/07)
- discover the power of LandExplorer with this webcast
- Note: Omicsoft LandExplorer data can be accessed from links in several core analysis tabs
- Videos showing the use of OmicSoft LandExplorer can be found here. Note that VIB users do not have full accesss to LandExplorer (via login) but can 'jump' to it from links in their core analysis results of gene detail pages. Info about the features accessible to IPA users can be found on that page.
VIB-only pages
(require VIB login)
- Transfer your IPA account before leaving VIB (VIB scientists only)
- IPA Q&A (VIB scientists only)
- IPA gene content (VIB scientists only)
- List of neurological Journals used in IPA (VIB scientists only)
